species:   Clros
pid:       PID2227
parent:    cro-mir-21
paralog:   
locus:     CADEHS020000004.2:1849985-1850028
matures:   ['UCUUCGGCGUCUUGGCUGU', 'GGUCGCAAGAUUUUCGAGGCCA']
srr:       ERR5950930
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950930.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950930.cram CADEHS020000004.2:1849985-1850028

1 out of bounds
3 alignments
2 proper strand
1 stranded perfect matches

********************** *********************
GGUCGCAAGAUUUUCGAGGCCAACUUCUUCGGCGUCUUGGCUGU
(((..((((((..((((((.......)))))).)))))))))..
-------------------------UCUUCGGCGUCUUGGCUGU l=19 a=0 c
GGUCGCAAGAUUUUCGAGGCCA---------------------- l=22 a=0 c*
---------------------AACUUCUUCGGCGUCU------- l=16 a=1 ma
GGUCGCAAGAUUUUCGAGGCCA---------------------- l=22 a=0 ma*

---------------------AACUUCUUCGGCGUCU------- l=16 a=1 (ma)
-----CAAGAUUUUCcAGGC------------------------ l=15 a=1 

mb-00011
ax-1001001
ku-01
ss-100010101100
fn-001
